PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009764158.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 218aa    MW: 23792.6 Da    PI: 4.4188
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009764158.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.71e-162271155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+G+r ++ +g+Wv+eIr+p++   ++r++lg+f t+e+Aa+a++ a+++l+g
  XP_009764158.1 22 PVYRGIR-CR-SGKWVSEIREPRK---TTRIWLGTFPTPEMAAAAYDVAALALKG 71
                    68****9.55.6*********843...5************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.0E-102271IPR001471AP2/ERF domain
PROSITE profilePS5103219.7172380IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-162381IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.106.7E-252380IPR001471AP2/ERF domain
SMARTSM003802.2E-252386IPR001471AP2/ERF domain
CDDcd000181.51E-142480No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MADLSNIVVE NKQSPRTNTK HPVYRGIRCR SGKWVSEIRE PRKTTRIWLG TFPTPEMAAA  60
AYDVAALALK GSSNVVLNFP CHVNFYPQLP PSPSPADIQS AAAIAAALMK KEAGDGIVVA  120
QQGNDDKLSG NSGGATCNEG DSVGATCNEG DSIEYPSPES YNVQIGEKYV DEDDVFYMPN  180
LLVDMAEAMM MSPPRINSST WEEYSRGDPS YIENLWSY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009764158.11e-163PREDICTED: ethylene-responsive transcription factor ERF027-like
TrEMBLM1AXQ23e-64M1AXQ2_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000326249e-64(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-29ERF family protein